BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D12LP1|AL426036
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig604 1616 0.0
>3x_Contig604
Length = 2699
Score = 1616 bits (815), Expect = 0.0
Identities = 818/819 (99%)
Strand = Plus / Minus
Query: 1 gatccattaatgctccgactgcaaatgccaagaccaggttttctagcaatgattccaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 gatccattaatgctccgactgcaaatgccaagaccaggttttctagcaatgattccaacg 1660
Query: 61 atgatctggtaatacaagggctgaatctagtaggaacagggctcaaacctcgctcccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 atgatctggtaatacaagggctgaatctagtaggaacagggctcaaacctcgctcccaga 1600
Query: 121 ccctgcgatacatgaaatcacacaacttttcaactccgaacgttgattctacgcgacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 ccctgcgatacatgaaatcacacaacttttcaactccgaacgttgattctacgcgacatg 1540
Query: 181 tttctaaaacggataaaatgtgtttagcagacactcagctaccgtcagaacaagaaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 tttctaaaacggataaaatgtgtttagcagacactcagctaccgtcagaacaagaaattg 1480
Query: 241 atgccaagtttgaagagttattgaatggacatgcgtttctaggtactgctaagcaaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 atgccaagtttgaagagttattgaatggacatgcgtttctaggtactgctaagcaaaatt 1420
Query: 301 tgaaaagcttgtcgtatacccgtaaatgggaattgattcagaaggaaaagaaactacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 tgaaaagcttgtcgtatacccgtaaatgggaattgattcagaaggaaaagaaactacatg 1360
Query: 361 gtgatataacgatgcaagacgattcaaaattgaatactttacatatgattttgagcaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 gtgatataacgatgcaagacgattcaaaattgaatactttacatatgattttgagcaatt 1300
Query: 421 tgaataagagattctcggttactcaaacactttatcaattggaacgtttacttcgacatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 tgaataagagattctcggttactcaaacactttatcaattggaacgtttacttcgacatg 1240
Query: 481 ctgattttatttcgctgtttgtgaatgcaaacggagtttcgattttgaatgggttcattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 ctgattttatttcgctgtttgtgaatgcaaacggagtttcgattttgaatgggttcattg 1180
Query: 541 atttattggataaaaaatcccagtacgtgtacttatgctgttataaagcattgcttaacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 atttattggataaaaaatcccagtacgtgtacttatgctgttataaagcattgcttaacg 1120
Query: 601 atacttcagcaagatctgtgatattccagaataatgattggataacttacgtcttctgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 atacttcagcaagatctgtgatattccagaataatgattggataacttacgtcttctgcc 1060
Query: 661 ttttaggaacgctcacaactgaccttagagttcgtcttttatctacccaaattgtgatcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 ttttaggaacgctcacaactgaccttagagttcgtcttttatctacccaaattgtgatcc 1000
Query: 721 ttctgacatattccactgaatggtcagattctttgttggaatcgttagatttgtgctacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 ttctgacatattccactgaatggtcagattctttgttggaatcgttagatttgtgctacg 940
Query: 781 aaagttggatccaggcagtacaaatgactcttcgaaacc 819
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 939 aaagttggatccaggcagtagaaatgactcttcgaaacc 901
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6474
Number of Sequences: 1807
Number of extensions: 6474
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)